| Primer | Sequence | Gene | Category | Reference |
| DACDF1(EMICLPQ | 5'-GAGATGATCTGYYTKCCKCAGG-3' | dachshund | eye | |
| DACDF2(FLKHLVG) | 5'-TTCCTGAAGCACNTGGTNGGNGG-3' | dachshund | eye | |
| DACDF3(VGGLHT) | 5'-GTNGGNGGNYTNCAYACNGT-3' | dachshund | eye | |
| DACDR1(PGRPPK) | 5'-CGCTTGGGCGGNCKNCCNGG-3' | dachshund | eye | |
| DACDR2(ELKMDV) | 5'-CKNARNACRTCCATYTTNARYTC-3' | dachshund | eye | |
| ARGF | 5'-CGTCACCTCCCTCAGGAGTGCGG | opsin | eye | |
| ARGPODOF | 5'-CAGGCCAAGAAGTGAACGTC | opsin | eye | |
| CRUSTYOP-1080F | 5'-TGCGYGMWCAGGCCAAGAAGATG | opsin | eye | |
| CRUSTYOP-1080R | 5'-CATCTTCTTGGCCTGWKCRCGC | opsin | eye | |
| CRUSTYOP-1350R | 5'-GGCTGATGGCRTACACAATAGGG | opsin | eye | |
| CRUSTYOP-540F | 5'-TCCTGKGTYAAYTSGC | opsin | eye | |
| DELGAPF | 5'-CAGGCCAAGAAGATGAGCGC | opsin | eye | |
| DELGAPR | 5'-CAGCGCTCATCTTCTTGGCC | opsin | eye | |
| EUBO | 5'-TTTGGTTTAGTAATAGAAGAGCGGGG-3' | Pax6 | eye | |
| FREDOPR1 | 5'-CTGCTTCTCGGCGCAGGTTTCTGCTG-3' | opsin | eye | |
| FREDOPR2 | 5'-GACTGATGGCGTACACCAGAGGGTTC-3' | opsin | eye | |
| FREDOPR3 | 5'-GGTCATGGCCACTTTAGCAATGCGGC | opsin | eye | |
| GAPF | 5'-GAACGTGGAGAGTCTCAGGAACGAGG | opsin | eye | |
| IVRH-F1 | 5'-TGTGAATTCGANCWRGCNAARARNATNAA | opsin | eye | |
| IVRH-F2 | 5'-GCGAATTCAATHTNYTNGTNSTNAA | opsin | eye | |
| IVRH-R1 | 5'-TGTAAGCTTAYNSCRTANAYNAYNGGRT | opsin | eye | |
| LERNERIF | 5'-TGAGCGCWGAATGCCGCATTGC | opsin | eye | |
| LERNERIF | 5'-TGAGCGCWGAATGCCGCATGC | opsin | eye | |
| MARY | 5'-TGGGCTTGATCACCTTCGAYMG-TWYAA | opsin | eye | |
| MOORE | 5'-GCAGGGTCTTGATGTTCATCTTYTNGCYTG | opsin | eye | |
| PODO-F | 5'-GGCCAAGAAGATGAACGTCCAGAGCC | opsin | eye | |
| PODOF2 | 5'-CCAAGAAGATGAACGTCCAGAGCC | opsin | eye | |
| RHODA | 5'-CACCCAGTTCATCACCACGYANGGNGTCCA | opsin | eye | |
| SIOP1R | 5'-CCCCCTCCTTTGCATGTGC | opsin | eye | |
| SIOP2R | 5'-GTGGGTGCAGGTATCTATTGC | opsin | eye | |
| SIOP3R | 5'-AAAGGTGTAGGAGAAGGTGC | opsin | eye | |
| SLF-8-00 | 5'-TGAGCGCWGAATGCCGCATTGC | opsin | eye | |
| SLSEX1F | 5'-CATCTGGACTCCWTATGCCAC | opsin | eye | |
| SLSEX1R | 5'-GTCTGTTGCTTCAACHGAAAC | opsin | eye | |
| SLSEX2F | 5'-GTCTCAGATCCCMTCTCTGGTGGGCTAAG | opsin | eye | |
| SLSEX2R | 5'-GAGAAACAATAAGCACATGAC | opsin | eye | |
| SLSEX3R | 5'-GTCTCAGATCCCMTCTCTGGTGGCTAAG | opsin | eye | |
| TYLER | 5'-CATGCGCGACCAGGCNAARAARATG | opsin | eye | |
| VH1-5'R | 5'-GACGGAACTATATTGTATAAATTAAG | opsin | eye | |
| VH2-3'R | 5'-GGTTGAGCATTACTGTTTCTCTCCGC | opsin | eye | |
| VH3 3'R | 5'-GTCTATTTTTCCCCTGTGGTGGTGGC | opsin | eye | |
| VH3 3'R | 5'-CACTGCTTCTCTTCGCTGGTGGTGG | opsin | eye | |
| VH3-MIDF | 5'-GGGCACACATCACGCCCCTGTCCGC | opsin | eye | |
| VH3-MIDR | 5'-GCGGACAGGGGCGTGTGTGTGCCC | opsin | eye | |
| VH-REVERSE | 5'-CCTGTGGGTCGCCTCTGGACTCCA | opsin | eye | |
| CZERNY99#1 | 5'-GCGAATTCTTYRYNAAYGGNMGRCCNYTNCC-3' | pax6 | eye | |
| CZERNY99#2 | 5'-CGCGCTAGCARYYKNKSYCKDATYTCC-3' | pax6 | eye | |
| CZERNY99#3 | 5'-GCGAAGCTTCKNSWDATRTCRCANGGNC-3' | pax6 | eye | |
| CZERNY99#4 | 5'-GCGGAATTCMGNCCNYTNCCNGAYWSNAC-3' | pax6 | eye | |
| CZERNY99#4 | 5'-GCGGAATTCMGNCCNYTNCCNGAYWSNAC-3 | pax6 | eye | |
| CZERNY99#5 | 5'-GCGAAGCTTSWDATRTCRCANGGNCKNG-3' | pax6 | eye | |
| CZERNY99#5 | 5'-GCGAAGCTTSWDATRTCRCANGGNCKNG-3' | pax6 | eye | |
| CZERNY99#6 | 5'-GCGGAATTCACNGGNWSNATHMGNC-3' | pax6 | eye | |
| CZERNY99#7 | 5'-GCGGAATTCGYNATHGGNWSNAA-3' | pax6 | eye | |
| CZERNY99#8 | 5'-GCGAAGCTTSWNGGRCAYTCNCKYTT-3' | pax6 | eye | |
| EUPAXBOF | 5'-GTCAACTCAGGCTGAGGTTA-3' | pax6 | eye | |
| EUPAXHETF | 5'-CAGAGACCGGTATTATCAGATGGTG-3' | pax6 | eye | |
| EUPAXHETFCOMPR | 5'-CACCATCTGATAATAACCGGTCTCTG-3' | pax6 | eye | |
| EUPAXHETR | 5'-CCTGTATTCTAGCTTCTGGAAGGCC-3' | pax6 | eye | |
| EUPAXIN6R-PHOS | 5'-/5PHOS/CGCTCTTCTATTACTAAACCAA-3' | pax6 | eye | |
| EUPH_COMPLITOYF | 5'-CGGCGGTGTGTTCAGCATTCAGTG-3' | pax6 | eye | |
| EUPH_COMPLITOYR | 5'-CTAAGATGGCAACTTTTTCTGTCATGC-3' | pax6 | eye | |
| Euphilomedes Paired Domain c-terminal region PLASMID 1017-d 9 | pax6 | eye | ||
| EUPHPAXF1 | 5'-CCAAGCCTAGAGTAGCTACGCCGAGCG-3' | pax6 | eye | |
| EUPHPAXF2 | 5'-GGGAATGYCCAAGCATATTCGCATGGG-3' | pax6 | eye | |
| FLY_EYF | 5'-TTGATGTTAGATTTACTTGCCTT-3' | pax6 | eye | |
| FLY_EYR | 5'-CAATTGCATTAAGGCACACGAAAT-3' | pax6 | eye | |
| FLY_TOYF | 5'-TTTTAATAGGTTTGGTTTTCAA-3' | pax6 | eye | |
| FLY_TOYR | 5-AACCTACTTGTAATTTTCAGCCAT-3' | pax6 | eye | |
| PAXDF1 | 5'-CCTTGTGATATTCTCGAATWCTNCAAGT-3' | pax6 | eye | |
| PAXDR1 | 5'-GGCCACACGTGGCTTGGATCCWCCKTAHCG-3' | pax6 | eye | |
| PAXEUPHRACE3 | 5'-GAAGAGCGTGCCGGAGACCGATGT-3' | pax6 | eye | |
| PAXgdr2 | 5'CCTTGCTAAGATTTTCGACACGCATCCGT-3' | pax6 | eye | |
| EUPH_SOF1 | 5'-CTAGGAATGTGTTAAGAGAGTGGTATACCCA-3' | sine oculis | eye | |
| EUPH_SOF2 | 5'-CCGTATCCATCGCCGCGGGAGAA-3' | sine oculis | eye | |
| SO2R-DEG | 5'-CGATCTCTTTGTCGTKGTTCTTRAACCA-3' | sine oculis | eye | |
| SODF2 | 5'-CCATTGCCCCGCACVATYTGGGATGG-3' | sine oculis | eye | |
| SOGDF-1 | 5'-GTACTCGAGTGGGAYGGCGARGARAC-3' | sine oculis | eye | |
| SOGDR1 | 5'-CCGTCTAGACNGCNCKRTCNCKTYG-3' | sine oculis | eye | |
| HCO2198 | 5'-TAAACTTCAGGGTGACCAAAAATCA-3' | 16s | mitochondrial | |
| HPK16SAA | 5'-ATGCTACCTTTGCCRGTCAAGATACYGCGG-3' | 16s | mitochondrial | |
| HPK16SBB | 5'-CTTATCGAYAAAAAAGWTTGCGACCTCGATG-3' | 16s | mitochondrial | |
| INSECT 16S-F | 5'-CCGGTTTGAACTCAGATCATGT-3' | 16s | mitochondrial | |
| INSECT 16S-R | 5'-CGCCTGTTTAACAAAAACAT-3' | 16s | mitochondrial | |
| LCO1490 | 5'-GGCAACAAATCATAAAGATATTGG-3' | 16s | mitochondrial | |
| INSECT CO1-F | 5'-AGCAGGAATTTCTTCAATTTT-3' | co1 | mitochondrial | |
| INSECT CO1-R | 5'-CTGTAAATATGTGATGTGCTC-3' | co1 | mitochondrial | |
| INSECT CYTB-F | 5'-TAGGATATGTTTTACCTTGAGGACA-3' | cytb | mitochondrial | |
| INSECT CYTB-R | 5'-CTCCTCCTAATTTATTAGGAATTG-3' | cytb | mitochondrial | |
| 28SEE | 5'-ATCCGACTAAGGAGTGTGTAACAACTCACC | 28s | nuclear | |
| 40.71F | 5'-GTAAAACGACGGCCAGATYGARAARTTYGARAARGARGCR | EF1alpha? | nuclear | |
| 41.2RC | 5'-GTAAAACGACGGCCAGTGYCTCATRTCDCGVACRGCRAA | EF1alpha? | nuclear | |
| FURFACE | 5'-GCGCATGTCTCAACATAGTCGA | luciferase | nuclear | |
| LUCY | 5'-GACCCAGTTATCGCTAACCCGT | luciferase | nuclear | |
| EuPrd Probe1017.2-9 | probe | probe | ||
| Probe fly ey2 9/7 e2 | probe | probe | ||
| Probe fly-ey 9/7 gel pure cut plasmid e1 | probe | probe | ||
| Probetoy 1 9/7 +1 | probe | probe | ||
| Probetoy 2 9/7eco cut gel pure plasmid +2 | probe | probe | ||
| Se Ce op.. Probe SIFICE HF8 | probe | probe | ||
| SLOP Probe 2 SEF1 CEHF12 | probe | probe | ||
| Sun's human prd Probe | probe | probe | ||
| 5'RACE | 5'-TTTTTTTTTTTTTTTTTTTTTTTTTTVN | RACE | technique | |
| LONGUMP | 5'-CTAATACGACTCACTATAGGGCAAGCAGTGGAACAACGCAGAGT | RACE | technique | |
| RACE-ADAPTER | 5'-GACTCGAGTCGACATCG | RACE | technique | |
| RACE-ADAPTER-8-00 | 5'-GACTCGAGTCGACATCG | RACE | technique | |
| RACE-ADAPTOR | 5'-GACTCGAGTCGACATCG | RACE | technique | |
| SHORT UPM | 5'-AAGCAGTGGTAACAACGCAGAGT | RACE | technique | |
| M13F | 5'-GTAAAACGACGGCCAGTGYCTCATRTCDCGVACRGCRAA | vector | technique | |
| M13R | 5'-GAGCGGATAACAATTTCACACAGG | vector | technique | |