#NEXUS

[File saved Tue Nov 23 16:07:50 2004]

BEGIN TAXA;
	TITLE Putative_Helicases; [internal gene family name 11_2/H]
	DIMENSIONS NTAX = 11;
	TAXLABELS
		YJL225C
		YIL177C
		YEL077C
		YLR467W
		YPL283C
		YNL339C
		YER190W
		YLL067C
		YLL066C
		YML133C
		YLR466W
		;
ENDBLOCK;

BEGIN CHARACTERS;
	TITLE  Cell_Cycle_CDC15;
	DIMENSIONS NCHAR=22;
	FORMAT DATATYPE = CONTINUOUS;
	MATRIX
	yjl225c 0.71 -0.93 -0.28 -0.26 0.08 0.46 0.24 1.18 0 -0.47 -0.35 -0.22 -0.79 0.32 -0.21 -0.02 0.36 0.54 -0.44 0.39 -0.37 -0.33 
ylr467w 0.88 -0.82 -0.44 -0.26 0.26 -0.59 1.09 1.29 -0.72 0.23 -0.65 -0.13 -0.95 0.5 -0.21 0.03 -0.24 0.42 0.21 0.55 -0.19 -0.39 
yil177c 0.82 -0.74 -0.41 -0.41 0.43 -0.49 0.88 1.21 -0.53 0.12 -0.59 -0.03 -0.87 0.17 -0.17 0.3 -0.25 0.38 0.08 0.69 -0.42 -0.29 
ypl283c 0.7 -0.78 -0.17 0.14 -0.37 1 -0.17 0.66 -1.03 0.73 -0.48 -0.13 -1.12 0.5 0.1 -0.02 0.27 -0.07 0.42 0.16 -0.48 -0.11 
yer190w 0.71 -0.74 -0.3 -0.33 0.18 -0.23 0.78 1.19 -0.19 -0.19 -0.29 -0.33 -1.3 0.65 -1 0.98 0.14 0.19 0.2 0.13 -0.07 -0.26 
ylr466w 1.05 -0.8 -0.43 -1.11 1.21 -0.6 0.93 0.06 0.41 0.24 -1.23 0.56 -0.6 0.19 -0.53 0.34 -0.2 -0.29 1.03 0.4 -0.35 -0.42 
yll067c 0.56 -0.85 -0.17 -0.31 0.12 0.41 0.31 0.83 -0.55 0.31 -0.42 -0.28 0.32 -0.7 0.2 -0.2 0.33 0.63 0.13 -0.58 -0.31 -0.3 
yel077c 0.75 -0.82 -0.33 -0.34 0.23 -0.32 0.69 1.16 -0.02 -0.47 -0.02 -0.31 -0.74 0.12 -0.85 1.05 0.12 0 0.31 0.18 -0.19 -0.23 
yll066c 0.66 -0.66 -0.31 -0.34 0.26 -0.51 1.14 0.89 -0.26 0.08 -0.63 -0.02 -1.03 0.36 -0.06 -0.05 -0.14 0.27 0.57 0.29 -0.38 -0.56 
yml133c 0.59 -0.73 0.12 -0.3 -0.31 0.37 0.09 1.11 -0.28 -0.12 -0.35 -0.07 -0.42 -0.51 0.69 -0.24 0.51 -0.55 0.71 -0.11 -0.37 -0.32 
ynl339c 0.79 -0.69 -0.38 0 -0.18 -0.64 1.23 1.23 -0.56 0.04 -0.46 -0.19 -1.13 0.48 0.14 -0.23 0.27 -0.89 1.23 0.56 -0.33 -0.42 ;

END;

BEGIN CHARACTERS;
	TITLE  Cell_Cycle_CDC28;
	DIMENSIONS NCHAR=14;
	FORMAT DATATYPE = CONTINUOUS;
	MATRIX
	yjl225c -0.36 0.05 0.63 -0.25 0.32 -1 0.06 -0.11 0.79 1.06 -1.19 -0.16 0.3 0.13 
ylr467w -0.22 0.32 0.07 -0.33 0.27 -0.6 -0.1 0.55 -0.24 1.6 -1.3 -0.19 0.3 -0.06 
yil177c -0.38 0.12 0.55 -0.43 -0.12 0.15 -0.2 -0.11 0.37 0.86 -1.06 0.28 -0.38 0.26 
ypl283c -0.24 0.27 0.55 -0.71 0.13 -0.55 0.08 0.08 0.11 1.48 -1.25 0 0.33 -0.26 
yer190w -0.22 0.09 0.66 -0.33 -0.33 -0.63 0.57 0.19 -0.18 1.22 -1.45 0.37 -0.3 0.15 
ylr466w -0.23 0.32 0.13 -0.29 0.09 -0.61 0.05 0.6 -0.38 1.55 -1.17 -0.15 0.19 -0.03 
yll067c -0.35 0.18 0.55 -0.57 0.35 -0.72 -0.06 0.65 -0.24 1.45 -1.31 -0.12 0.25 -0.08 
yel077c -0.47 0.52 0.25 -0.15 -0.03 -0.54 0.13 0.11 -0.12 1.35 -1.37 0.15 0.24 -0.24 
yll066c -0.18 -0.07 0.74 -0.6 0.24 -0.82 0.1 0.33 0.08 1.47 -1.39 -0.36 0.68 -0.03 
yml133c -0.19 -0.15 0.93 -0.74 -0.16 -0.35 0.28 -0.05 0.23 1.5 -1.25 -0.23 0.32 0.02 
ynl339c -0.19 0.14 -0.21 0.18 0.22 -0.79 0.23 0.03 0.2 1.39 -1.09 -0.11 0.45 -0.49 ;

END;

BEGIN CHARACTERS;
	TITLE  Amino_Acid_Starvation;
	DIMENSIONS NCHAR=5;
	FORMAT DATATYPE = CONTINUOUS;
	MATRIX
	yjl225c 0.77 0.99 0.7 0.62 0.2 
ylr467w 0 0.58 0.61 0.48 0.28 
yil177c 0.7 0.64 0.48 0.53 0.32 
ypl283c 0.74 0.04 0.26 0.36 -0.23 
yer190w 0.59 0.2 0.03 0.42 0.26 
ylr466w 0.16 0.32 0.16 0.15 0.26 
yll067c 0.7 0.46 0.23 0.52 0.21 
yel077c 0.58 0.04 -0.18 0.51 0.07 
yll066c 0.44 0.67 0.66 0.79 0.29 
yml133c 0.7 0.65 -0.23 -0.15 0.07 
ynl339c 0.51 0.05 -0.57 0.25 0.22 
;

END;

BEGIN CHARACTERS;
	TITLE  DTT2;
	DIMENSIONS NCHAR=7;
	FORMAT DATATYPE = CONTINUOUS;
	MATRIX
	yjl225c 0.16 -0.12 -0.25 -0.23 -0.34 -0.18 0.46 
ylr467w -0.03 -0.14 -0.03 -0.22 -0.56 0.08 0.32 
yil177c -0.3 -0.76 -0.06 -0.47 -0.45 0.33 -0.17 
ypl283c -0.19 -0.74 -0.11 0.26 0.72 -0.1 0.67 
yer190w -0.04 -0.64 0.08 -0.45 -0.27 0.06 0.28 
ylr466w 0.04 -0.22 -0.29 -0.01 -0.29 0.21 0.4 
yll067c 0.28 -0.03 -0.03 -0.34 -0.3 0.14 0.45 
yel077c 0.03 -0.79 -0.3 -0.79 -0.42 0 0.34 
yll066c -0.25 -0.25 0 -0.14 -0.09 -0.3 0.43 
yml133c -0.4 -0.69 -0.03 -1.32 -0.43 0 0.23 
ynl339c -0.09 -0.68 -0.25 -0.69 -0.39 -0.22 0.54 
;

END;

BEGIN CHARACTERS;
	TITLE  Carbon_Change;
	DIMENSIONS NCHAR=6;
	FORMAT DATATYPE = CONTINUOUS;
	MATRIX
	yjl225c 0.77 1.04 1.51 0.85 0.41 0.95 
ylr467w 0.08 0.55 1.33 1.08 0.63 1.36 
yil177c 0.73 0.55 0.86 0.79 0.7 1.28 
ypl283c 0.41 -1.06 -1.07 -0.37 -0.36 -1.13 
yer190w 0.87 0.19 0.46 0.57 0.39 0.72 
ylr466w 0.38 0.2 0.41 -0.27 0.58 1 
yll067c 0.54 0 1.26 0.5 0.57 1.09 
yel077c 0.19 0.25 0.25 0.12 0.15 0.37 
yll066c 0.6 0.71 1.11 0.78 0 0.89 
yml133c 0.7 0.48 0.89 0.15 0.97 1.7 
ynl339c -0.12 -0.05 -0.41 0.14 0.03 -0.29 ;

END;

BEGIN CHARACTERS;
	TITLE  Heat2;
	DIMENSIONS NCHAR=7;
	FORMAT DATATYPE = CONTINUOUS;
	MATRIX
	yjl225c -0.1 0.19 0.26 -0.74 0.08 -0.18 0.42 
ylr467w -0.06 -0.09 -0.1 -0.62 -0.32 -0.04 0.15 
yil177c -0.22 -0.07 0 -0.81 0.18 -0.14 0.24 
ypl283c 0.77 -0.53 0.79 0.41 0.2 0.23 -0.2 
yer190w -0.36 -0.2 0.52 -0.69 0.19 -0.03 -1.32 
ylr466w -0.03 0.06 0.03 -0.45 0.31 0.34 0.28 
yll067c -0.01 0.12 0.04 -0.36 0.23 0.26 0.14 
yel077c -0.3 -0.4 -0.17 -0.54 0.14 -0.03 0.15 
yll066c -0.2 -0.03 -0.36 -0.67 0.2 -0.43 0.33 
yml133c -0.14 -0.12 -0.17 -0.64 -0.07 -0.18 -0.15 
ynl339c 0.01 -0.32 -0.09 0.06 -0.01 -0.25 -0.01 ;

END;

BEGIN CHARACTERS;
	TITLE  Sorbitol;
	DIMENSIONS NCHAR=7;
	FORMAT DATATYPE = CONTINUOUS;
	MATRIX
	yjl225c 0.21 -0.32 -0.62 -0.32 -0.09 -0.2 -0.23 
ylr467w -0.18 -0.32 -0.6 -0.14 -0.23 -0.2 -0.2 
yil177c -0.01 -0.34 -0.51 -0.12 -0.1 -0.18 -0.17 
ypl283c 0.1 -0.4 -0.41 0.03 -0.22 -0.32 -0.2 
yer190w 0.37 -0.3 -0.69 -0.36 0.23 0.03 -0.56 
ylr466w -0.01 -0.12 -0.54 -0.2 -0.22 0.29 -0.23 
yll067c 0.07 -0.18 -0.42 -0.36 -0.2 -0.23 -0.27 
yel077c 0.12 -0.3 -0.45 0.12 0.2 -0.32 -0.67 
yll066c 0.04 -0.18 -0.38 -0.14 -0.2 -0.43 -0.36 
yml133c 0.1 -0.23 -0.58 0.19 -0.3 -0.42 -0.3 
ynl339c 0.07 0.04 -0.17 -0.33 0.04 -0.25 -0.41 ;

END;

BEGIN CHARACTERS;
	TITLE  YPD;
	DIMENSIONS NCHAR=10;
	FORMAT DATATYPE = CONTINUOUS;
	MATRIX
	yjl225c -0.12 0.58 0.86 0.81 0.58 0.99 0.41 0.94 1.02 0.29 
ylr467w 0.34 0.57 0.69 0.42 0.96 0.82 0.3 1.02 1.3 0.49 
yil177c -0.12 0.48 0.75 0.62 0.18 0.44 0.38 0.37 0.84 0.52 
ypl283c -0.14 0.15 -1.27 -0.14 -0.25 -0.42 -0.41 0.14 0.09 1.37 
yer190w 0.06 0.41 0.73 0.6 -0.1 0.33 0.53 1.06 0.72 0.45 
ylr466w 0.6 0.36 1.14 0.7 0.23 0.48 0.74 0.86 0.37 -0.17 
yll067c 0.15 0.52 0.75 0.71 0.42 0.77 0.6 1.2 0.82 0.34 
yel077c 0.43 -0.03 0.37 0.45 -0.43 0.04 0.24 1.01 0.49 -0.18 
yll066c 0.26 0.08 1.08 0.59 0.34 0.2 -0.18 1.2 0.96 0.18 
yml133c -0.64 -0.62 0.68 0.44 -0.22 0.16 -0.4 1.2 0.55 0.63 
ynl339c -0.12 -0.32 -0.06 0.03 -0.14 -0.37 -0.37 0.61 0.42 0.71 ;

END;

BEGIN CHARACTERS;
	TITLE  Zinc;
	DIMENSIONS NCHAR=9;
	FORMAT DATATYPE = CONTINUOUS;
	MATRIX
	yjl225c -0.1 0.34 0.96 0.37 -0.22 0.61 -0.3 0.06 0.28 
ylr467w 0.01 -0.01 0.96 0.3 -0.09 0.66 -0.22 -1.29 -0.2 
yil177c -0.12 0.07 1.37 0.56 0 0.03 -0.12 -0.67 -0.01 
ypl283c -0.37 0.13 0.35 -0.06 -0.23 -1.22 -1.3 -1.94 -0.55 
yer190w -0.14 0.33 0.88 0.54 0.06 0.54 -0.1 0.45 0.23 
ylr466w 0.03 0.12 0.77 0.4 -0.12 0.41 -0.06 -0.25 -0.12 
yll067c -0.04 0.34 1.15 0.48 -0.04 0.44 -0.06 0.1 0.24 
yel077c -0.58 -0.04 0.52 0.28 -0.01 -0.29 -0.54 -1.22 -0.3 
yll066c -0.07 0.11 1.19 0.2 -0.15 0.49 -0.07 0.14 0.21 
yml133c -0.1 0.07 0.77 0.59 -0.06 0.32 -0.45 -0.97 -0.14 
ynl339c -0.3 -0.32 -0.35 0.14 0.15 -0.33 -0.19 0.09 -0.4 
;

END;

BEGIN CHARACTERS;
	TITLE  Menadione;
	DIMENSIONS NCHAR=9;
	FORMAT DATATYPE = CONTINUOUS;
	MATRIX
	yjl225c -0.89 -0.49 -0.86 -0.49 -0.71 -0.64 -0.49 -0.01 -0.86 
ylr467w -0.32 -0.45 -0.47 -0.45 -0.09 -0.69 -0.2 0.32 -0.09 
yil177c -0.39 -0.41 -0.06 -0.58 -0.08 -0.12 -0.19 -0.35 -0.25 
ypl283c -0.24 -0.31 0.05 -0.13 -0.29 -0.15 -0.33 0.17 -0.43 
yer190w -0.94 -0.92 -0.51 -1.15 -0.54 -1.25 -0.76 -0.79 -0.58 
ylr466w -0.09 -0.36 -0.58 -0.81 -0.74 -0.17 -0.3 0.23 -0.45 
yll067c -0.58 -0.6 -0.94 -0.54 -0.45 -0.97 -0.6 -0.14 -0.92 
yel077c -0.27 -0.74 -0.22 -0.89 -0.25 -0.12 -0.81 -0.84 -0.3 
yll066c -0.76 -0.34 -0.56 -0.71 -0.14 -0.67 -0.4 -0.04 -0.51 
yml133c -0.4 -0.64 0.11 -0.32 -0.3 -0.03 -0.38 -0.17 -0.1 
ynl339c -0.27 -0.34 -0.74 -0.57 -0.45 -0.27 -0.07 -0.2 -0.13 ;

END;

BEGIN CHARACTERS;
	TITLE H2O2;
	DIMENSIONS NCHAR=6;
	FORMAT DATATYPE = CONTINUOUS;
	MATRIX
yjl225c 0.2 -0.49 -0.09 0.23 0.23 0.51
ylr467w 0.07 -0.61 0.45 0.21 0.32 -0.18
yil177c -0.22 -0.08 0.27 -0.33 0.74 0.2
ypl283c 0.07 -0.3 -0.29 0.28 0.47 -0.13
yer190w -0.54 0.44 -0.24 -0.13 0.51 0.16
ylr466w 0.25 -0.61 0.02 0.02 0.68 -0.1
yll067c 0.08 -0.94 0.59 0.02 0.51 0.35
yel077c -0.62 0.28 -0.17 0.17 0.58 -0.08
yll066c -0.23 0.17 -0.21 0 0.28 0.41
yml133c -0.09 0.65 -0.48 -0.23 0.34 -0.26
ynl339c -0.41 -0.27 0.66 0.18 -0.07 0.74
;

END;

BEGIN TREES;
	TRANSLATE
		1	YJL225C,
		2	YIL177C,
		3	YEL077C,
		4	YLR467W,
		5	YPL283C,
		6	YNL339C,
		7	YER190W,
		8	YLL067C,
		9	YLL066C,
		10	YML133C,
		11	YLR466W
		;
	UTREE * PHYLIP_1= (11:0.072562,((3:0.015907,(1:0.000218,2:0.000218):0.015689):0.032401,((4:0.002639,(7:0.000868,(5:0.000168,6:0.000168):0.000700):0.001772):0.002167,(10:0.001782,(8:0.001299,9:0.001299):0.000483):0.003024):0.043501):0.024254);
ENDBLOCK;