MAXIMUM LIKELIHOOD MAP COORDINATES OF LOCI ON VARIOUS
LINKAGE GROUPS
(Update under preparation)
Contents:
1. Explanation of the map coordinates
2. Overview - Distribution of linkage groups among chromosome arms
3. List of map coordinates
---------------
1. Explanation of the map coordinates
- The map coordinates below allow anyone to draw a linkage map of any of
the linkage groups currently identified.
- Within each linkage group, loci are listed in map order and their
coordinate (in cM) along the map is shown.
- Distances were corrected for undetected multiple crossovers using the
Haldane equation.
- Only one representative locus is generally shown for groups of loci
not yet resolved by recombination ("coincident loci"). Other members of
the group are listed in the MIC database; they and can be found by
searching for the name of the representative locus.
- Maps drawn approximately to scale can be accessed from the main page.
2. Overview - Distribution of linkage groups among chromosome arms
1L CEN 2R 2L CEN 1R
--------------0-------------- --------------0--------------
1L-MJ10 2R-Mpr 2L-BB01R 1R-AT01
1L-SP13* 2R-JO66 2L-mat 1R-ChxA
3L CEN 3R 4L CEN 4R
--------------0-------------- --------------0--------------
3L-JB36 3R-AcpA 4L-AS01 4L-BR19 4R-LC01
3L-JO25 3R-JO06 4L-JB06
3L-MJ18R 3R-LC08 4L-QD02
3L-XS43 4L-QD02R
3L-EstB
5 X
----------------------------- ---------
5X-JB04 XX-KP04R
5X-JP02
5X-LC16a
* Linkage group 1L-SP13 was originally assigned to chromosome 1L but may
be in 2R (currently under investigation).
3. List of map coordinates
LOCUS MAP COOR-
DINATE (cM)
-----------------------------
LINKAGE GROUP lg1L-MJ10
1BR12 0.0
1MJ10 5.9
LINKAGE GROUP lg1L-SP13
1LR03 0.0
1SP13 9.6
LINKAGE GROUP lg2R-Mpr
1LC04R 0.0
1CH02 26.9
1KP02R 38.0
1JO71 49.5
1YD13 61.0
1AT04 71.5
1LS21 85.4
Mpr 105.0
LINKAGE GROUP lg2R-JO66
1XS27 0.0
1JO66 4.2
LINKAGE GROUP lg1R-ChxA
1XS32 0.0
1LC04 13.2
1JB12 28.8
EstA 34.9
1BR20 42.3
1LC09R 54.3
1JO91R 62.1
1JB30 67.2
1JB14 69.4
Chx 71.2
1KN02 83.4
1ML03 89.3
1JO14 94.3
1LS07 108.6
1JB22 117.3
1JB08 119.4
1JP12a 126.1
1JO18 146.6
1JO15 163.7
1BD03 178.3
1LN02b 200.1
1LN01b 204.0
LINKAGE GROUP lg1R-AT01
1JP18 0.0
1JP18a 3.4
1SP18R 10.6
1BR11 14.9
1EM01 25.6
1AT01 52.9
1XS17 65.3
1JB05 73.1
1LR01 80.8
1JO03 95.0
1LC02 119.8
1JO05 128.8
1JO05R 135.8
1JO56R 146.8
1SN03 155.5
1LC10 164.2
J083R 167.5
1LC21 178.5
1YD02 197.3
1JB28 201.3
1JO65 205.9
1LS18R 218.9
LINKAGE GROUP lg2L-mat
1JO39R 0.0
1YD20R 3.4
1SN09 10.1
1EO03R 10.1
1JP11 10.1
1LS15 14.2
1JO16 16.2
1JP33 16.2
1BD08R 18.2
1AT03R 18.2
1AT03 21.2
1JO09 25.4
1XS10 30.0
1XS19 35.3
1JB11 52.0
1AS02 55.8
1KF02 57.3
1EO01 60.3
1PM08 61.8
mat 64.9
1KN03 69.5
1XS24 69.6
1GM09 74.7
1JO13R 78.6
1CH01 84.3
1XS23 89.7
1YD19 95.1
1EM04 95.1
1JP34 100.4
1JB10 103.0
1JO06R 117.2
1XS63R 126.2
Pmr 126.3
1EM10 126.3
1SP09 126.3
1AT14 137.3
1BD06 148.5
1BD11 157.6
1XS36 165.8
1RT01 170.4
1JB03 174.3
1JP17 189.9
1SP19R 206.8
1SP11R 230.5
LINKAGE GROUP lg2L-BB01R
1BB01R 0.0
1BR04 15.5
LINKAGE GROUP lg3L-JB36
1JB35 0.0
1JB15 16.8
1JB36R 24.2
LINKAGE GROUP lg3L-EstB
EstB 0.0
1JP03 21.1
LINKAGE GROUP lg3L-JO25
1JP23 0.0
1JO25 18.4
LINKAGE GROUP lg3L-MJ18R
1MJ18R 0.0
1JP23 3.8
LINKAGE GROUP lg3L-XS43
1XS43 0.0
1JB26 5.3
LINKAGE GROUP lg3R-JO06
1LC09 0.0
1BD13 12.8
1BD28R 30.7
1RK01R 34.0
1JO22 37.2
1JO06 40.5
1JO35R 47.7
1LC21R 56.4
LINKAGE GROUP lg3R-LC08
1GM03 0.0
1LC08 12.1
1JB21 23.8
LINKAGE GROUP lg3R-AcpA
AcpA 0.0
1XS61R 16.8
LINKAGE GROUP lg4L-AS01
1JB07 0.0
1LS01 20.6
1JP06a 29.6
1LS03 32.9
1RK04 39.6
1XS04 42.8
1LS25 46.0
1LS22 49.2
1MJ04 52.4
1YD20 55.6
1LS16 69.1
1AS01 73.5
1JB18 80.6
1XS15 84.0
1XS04a 87.4
1JO27 102.4
1JO27a 107.3
LINKAGE GROUP lg4L-QD02R
1QD02R 0.0
1JB12R 12.6
1JO82R 31.5
1ML04R 42.0
1AT18 65.5
1KF03 90.0
LINKAGE GROUP lg4L-JB06
1JO02 0.0
1JB06 8.7
1JP21 12.0
1ML02 15.2
1LC25 30.5
1JO04 43.7
1LS09 58.4
LINKAGE GROUP lg4L-QD02
1BR21 0.0
1JO52R 4.0
1QD02 16.6
LINKAGE GROUP lg4L-BR19
1LS02 0.0
1SN11 14.6
1SN21 21.3
1KF04 25.7
1BR19 38.9
1JO84R 59.2
1KP05a 73.8
1MJ08 79.0
1JB37 84.0
1AT11 90.8
1LK04 97.5
1RK03 104.4
LINKAGE GROUP lg4R-LC01
1JO60 0.0
1JP05 6.9
1JO20R 42.7
1JO31R 57.1
1XS74R 61.2
1LS26R 76.8
1XS16 86.7
1JO37R 93.6
1JO34R 104.2
1KP03R 107.5
1JB19 110.8
1LS29R 117.6
1LS30R 121.8
1LC26 135.4
1LS14 143.2
1JO06a 160.7
1JO62 165.8
1BD10 170.8
1AT04R 177.6
1AT17 188.2
1JO26 203.3
1JO36R 221.9
1LC06 246.8
1LC20 259.6
1BD32 271.4
LINKAGE GROUP lg5X-JB04
1SN13 0.0
1JB02 24.3
1JB23 40.5
1JP09 62.1
1BD25 77.0
1JB17 87.8
1XS11 91.0
1LC18 94.2
1YD07 98.6
1JP08d 107.8
1GM02 115.3
1JB04 122.9
1JO10a 138.4
1LC19 144.9
1JP33a 155.3
1AT06 164.9
1SP18aR 179.6
1JP01 194.2
1JO92R 200.9
1SP18 204.1
1JO01 207.3
1JP12 210.5
1EM02 213.7
1JB33 228.4
1XS49 236.1
1XS53 245.5
1AS02R 272.2
1SP10 276.1
1RK04a 294.3
1BD34 309.4
1BR13 329.6
1JB24 340.7
1JO67 347.7
1JO56 354.8
1JB01 365.8
LINKAGE GROUP lg5X-LC16a
1RK08 0.0
1YD16 8.4
1BD34R 12.8
1LC16a 22.1
1GM08 30.9
1JO68 39.7
1SP16R 56.5
1LC02a 72.1
LINKAGE GROUP lg5X-JP02
1XS01R 0.0
1JO75R 3.6
1JP02 36.4
1JB29 41.7
1JP04 47.1
1LS28R 53.9
LINKAGE GROUP lgXX-KP04R
1JO04R 0.0
1KP04R 9.2
1XS72R 13.2