JP - LS RAPD DNA
polymorphisms
- Alphabetical list
Click here for the
key
to the list of RAPD loci and abbreviations used.
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|
Locus |
Primers |
Mg |
Size (Kb) |
Same |
Other |
Linkage |
Coassortment |
|
name |
|
mM |
|
as? |
notes |
group (MIC) |
group (MAC) |
|
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======= |
== |
========= |
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============ |
|
1JP01/R |
A01 B01 |
|
0.55/0.45 |
|
|
lg5X-JB04 |
cag5X-BR02 |
|
1JP02 |
A01 B02 |
|
0.6 |
|
|
lg5X-JP02 |
cag5X-JP04 |
|
1JP03 |
A03 B01 |
|
1.2 |
|
|
3L-FBR1 |
cag3L-JP03 |
|
1JP04 |
A13 B02 |
|
0.4 |
|
|
lg5X-JP02 |
cag5X-JP04 |
|
1JP05 |
A11 B07 |
|
0.9 |
|
|
lg4R-LC01 |
MiLtd |
|
1JP06 |
A07 B15 |
|
0.9 |
|
|
lg5X-JB04 |
MiLtd |
|
1JP06a |
A07 B15 |
|
0.8 |
|
|
lg4L-AS01 |
cag4L-JP06a |
|
1JP08d |
A01 B07 |
|
0.6 |
|
|
lg5X-JB04 |
cag5X-JP08d |
|
1JP09 |
A01 B14 |
|
0.9 |
|
|
lg5X-JB04 |
cag5X-LR01R |
|
1JP11 |
A02 B10 |
|
1.2 |
|
|
lg1L-mat |
MiLtd |
|
1JP12 |
A02 B11 |
|
0.35 |
|
|
lg5X-JB04 |
cag5X-JP12 |
|
1JP12a |
A02 B11 |
|
0.4 |
1JP12a |
|
lg1R-CHX1 |
cag1R-JP12a (+) |
|
1JP17 |
A12 B12 |
|
0.95 |
|
|
lg1L-mat |
cag1L-JP17 |
|
1JP18 |
A07 B14 |
|
0.35 |
|
|
lg1R-GAL1 |
cag1R-SP18R |
|
1JP18a |
A07 B14 |
|
0.7 |
|
|
lg1R-GAL1 |
cag1R-SP18R |
|
1JP18R |
A07 B14 |
|
0.5? |
|
|
lg1R-GAL1 |
cag1R-SP18R |
|
1JP19 |
A07 B19 |
|
0.9 |
|
|
lg4L-AS01 |
cag4L-JP19 |
|
1JP21 |
A08 B12 |
|
0.8 |
|
|
lg4L-BR19 |
cag4L-LK04 |
|
1JP21a |
A08 B12 |
|
1.6 |
|
|
lg4L-JB06 |
cag4L-JP21a |
|
1JP22 |
A08 B17 |
|
0.35 |
|
|
lg4L-BR19 |
cag4L-JP22 |
|
1JP22R |
A08 B17 |
|
0.75 |
|
|
lg5X-JB04 |
cag5X-LC16 |
|
1JP23 |
A10 B14 |
|
0.8 |
|
|
lg3L-FBR1 |
cag3L-JP23 |
|
1JP24 |
A11 B06 |
|
0.35 |
|
|
lg3R-JO06 |
cag3R-JB16 |
|
1JP27 |
A11 B20 |
|
0.6 |
|
|
lg4R-LC01 |
MiLtd |
|
1JP33/R |
A04 B01 |
|
0.9/0.7 |
|
|
lg1L-mat |
cag1L-AT03 |
|
1JP34 |
A04 B05 |
|
0.95 |
|
|
lg1L-mat |
MiLtd |
|
1KF02 |
A02 C06 |
|
0.6 |
|
|
lg1L-mat |
cag1L-PM08 |
|
1KF03 |
A02 C05 |
|
0.55 |
|
|
lg4L-QD02R |
cag4L-KF03 |
|
1KF04 |
A08 C17 |
|
0.95 |
|
|
lg4L-BR19 |
MiLtd |
|
1KN02 |
A02 A17 |
|
0.41 |
|
|
lg1R-CHX1 |
cag1R-ML03 |
|
1KN03 |
A02 A17 |
|
0.3 |
|
|
lg1L-mat |
cag1L-KN03 |
|
1KP01R |
D03 D08 |
|
1.5 |
1KP04R |
|
lg3R-KP04R |
MiLtd |
|
1KP02R |
A04 A07 |
|
1.5 |
|
|
lg2R-MPR1 |
cag2R-MPR1 |
|
1KP03R |
A06 A09 |
|
0.6 |
1KP03R |
|
lg4R-LC01 |
ND |
|
1KP04R |
D08 D14 |
|
1.5 |
1KP04R |
|
lg3R-KP04R |
MiLtd |
|
1LC02 |
A12 C06 |
|
0.5 |
|
|
lg1R-GAL1 |
cag1R-MJ16R |
|
1LC02a |
A12 C06 |
|
0.47 |
|
|
lg5X-LC16a |
cag5X-JO68 |
|
1LC03 |
A02 C13 |
|
0.7 |
|
|
lg1R-CHX1 |
cag1R-ML03 |
|
1LC04 |
A03 C06 |
|
0.2 |
|
|
lg1R-CHX1 |
cag1R-EstA |
|
1LC04R |
A03 C06 |
|
1.0 |
|
|
lg2R-MPR1 |
MiLtd |
|
1LC05 |
A06 C08 |
|
1.5 |
|
|
5X-LC05 (UL) |
MiLtd |
|
1LC06 |
A08 C02 |
|
1.3 |
|
|
lg4R-LC01 |
ND |
|
1LC07 |
A08 C08 |
|
1.5 |
1BR05 |
|
lg5X-JB04 |
MiLtd |
|
1LC08 |
A09 C02 |
|
0.35 |
|
|
lg3R-LC08 |
cag3R-JB21 |
|
1LC09 |
A12 C11 |
|
0.6 |
|
psMiL |
lg3R-JO06 |
cag3R-LC09 (+) |
|
1LC09R |
A12 C11 |
|
0.3 |
|
|
lg1R-CHX1 |
cag1R-LC09R |
|
1LC10 |
A05 C08 |
|
1.4 |
|
|
lg1R-GAL1 |
cag1R-LC10 |
|
1LC10a |
A05 C08 |
|
1.55 |
1BR05 |
|
lg5X-JB04 |
MiLtd |
|
1LC11 |
A05 C11 |
|
0.85 |
|
|
lg1R-CHX1 |
MiLtd |
|
1LC12 |
A10 C05 |
|
0.3 |
1JB15 |
|
lg3L-JB36 |
MiLtd |
|
1LC16 |
A01 C02 |
|
0.6 |
|
|
lg5X-JB04 |
cag5X-LC16 |
|
1LC16a |
A01 C02 |
|
1.3 |
|
|
lg5X-LC16a |
cag5X-LC16a |
|
1LC18 |
A04 C10 |
|
0.25 |
|
|
lg5X-JB04 |
cag5X-LR01R |
|
1LC18a |
A04 C10 |
|
|
|
|
lg5X-JB04 |
cag5X-JO67 |
|
1LC19 |
A04 C18 |
|
0.9 |
|
|
lg5X-JB04 |
cag5X-LR01R |
|
1LC20 |
A02 C20 |
|
0.9 |
|
|
lg4R-LC01 |
cag4R-LC20 |
|
1LC20R |
A02 C20 |
|
0.2 |
|
|
lg5X-JB04 |
cag5X-JP08d |
|
1LC21 |
A12 C20 |
|
1.2 |
|
|
lg1R-GAL1 |
cag1R-GRL7 |
|
1LC21R |
A12 C20 |
|
0.7 |
|
|
lg3R-JO06 |
cag3R-LC21R |
|
1LC25 |
A06 C07 |
|
0.3 |
|
|
lg4L-JB06 |
MiLtd |
|
1LC26 |
A03 C01 |
|
0.4 |
|
|
lg4R-LC01 |
cag4R-LC26 |
|
1LK04 |
B07 B13 |
|
1.25 |
|
|
lg4L-BR19 |
cag4L-LK04 |
|
1LN01t |
B09 B17 |
|
1.6 |
|
|
lg4L-QD02 |
MiLtd |
|
1LR01R |
D01 E04 |
|
0.42 |
|
|
lg5X-JB04 |
cag5X-LR01R |
|
1LR03 |
D03 E15 |
|
1.1 |
|
|
lg2L-SP13 |
cag2L-SP13 |
|
1LR07R |
D08 E18 |
|
0.37 |
|
psMiL |
XX-LR07R (UL) |
cagXX-LR07R (+) |
|
1LS01 |
A07 E13 |
|
0.9 |
|
|
lg4L-AS01 |
cag4L-LS01 |
|
1LS02 |
A06 E09 |
|
1.4 |
|
|
lg4L-BR19 |
MiLtd |
|
1LS02R |
A06 E09 |
|
0.75 |
|
|
lg4L-QD02R |
cag4L-ML04R |
|
1LS03 |
A06 E12 |
|
1.8 |
1YD20 |
|
lg4L-AS01 |
cag4L-YD20 |
|
1LS03R |
A06 E12 |
|
1.0 |
1YD20R |
|
lg1L-mat |
MiLtd? |
|
1LS04 |
A03 E18 |
|
1.2 |
|
|
lg4R-LC01 |
cag4R-LS04 |
|
1LS07 |
A02 E02 |
|
0.45 |
|
|
lg1R-CHX1 |
cag1R-ML03 |
|
1LS09 |
A02 E19 |
|
0.8 |
|
|
lg4L-JB06 |
cag4L-JP21a |
|
1LS10 |
A14 E19 |
|
0.6 |
|
|
lg5X-JB04 |
cag5X-JP12 |
|
1LS12 |
A06 E18 |
|
1.3 |
|
|
lg5X-JB04 |
MiLtd |
|
1LS14 |
A01 E16 |
|
1.5 |
|
|
lg4R-LC01 |
ND |
|
1LS15 |
A05 E04 |
|
1.1 |
|
|
lg1L-mat |
cag1L-AT03 |
|
1LS15R |
A05 E04 |
|
1.3 |
|
|
lg5X-JB04 |
cag5X-BR02 |
|
1LS17 |
A09 E12 |
|
0.7 |
|
|
lg1R-GAL1 |
cag1R-SP18R |
|
1LS18 |
A07 E05 |
|
0.95 |
|
|
lg4L-AS01 |
cag4L-LS18 |
|
1LS18R |
A07 E05 |
|
0.22 |
|
psMiL |
lg1R-GAL1 |
cag1R-LS18R (+) |
|
1LS19 |
A07 E08 |
|
0.95 |
1JO27 |
|
lg4L-AS01 |
ND |
|
1LS20R |
A08 E01 |
|
0.5 |
|
|
lg1R-GAL1 (UM) |
cag1R-GRL7 |
|
1LS21 |
A08 E16 |
|
0.55 |
|
|
lg2R-MPR1 |
cag2R-MPR1 |
|
1LS21a |
A08 E16 |
|
0.65 |
|
|
lg1R-GAL1 |
ND |
|
1LS22 |
A07 E09 |
|
0.9 |
|
|
lg4L-AS01 |
cag4L-LS22 |
|
1LS25 |
A07 E10 |
|
0.9 |
1JO27 |
|
lg4L-AS01 |
ND |
|
1LS26R |
A09 E13 |
|
0.65 |
1KP03R |
|
lg4R-LC01 |
ND |
|
1LS28R |
A10 E19 |
|
0.35 |
|
|
lg5X-JP02 |
cag5X-LS28R |
|
1LS29R |
A09 E09 |
|
0.6 |
1KP03R |
|
lg4R-LC01 |
ND |
|
1LS30R |
A09 E17 |
|
0.65 |
1KP03R |
|
lg4R-LC01 |
ND |
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