MJ - YD RAPD
DNA polymorphisms
- Alphabetical list
Click here for the
key
to the list of RAPD loci and abbreviations used.
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|
Locus |
Primers |
Mg |
Size (Kb) |
Same |
Other |
Linkage |
Coassortment |
|
name |
|
mM |
|
as? |
notes |
group (MIC) |
group (MAC) |
|
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|
1MJ01 |
G05 G20 |
|
1.4 |
|
|
lg1R-GAL1 |
cag1R-MJ01 |
|
1MJ04 |
G03 G14 |
|
0.75 |
|
|
lg4L-AS01 |
cag4L-YD20 |
|
1MJ08 |
|
|
|
|
|
lg4L-BR19 |
cag4L-MJ08 |
|
1MJ10 |
G16 G16 |
|
0.7 |
|
|
lg2L-MJ10 |
MiLtd |
|
1MJ10aR |
G16 G16 |
|
0.95 |
|
|
lg1L-mat |
cag1L-YD19 |
|
1MJ10R |
G16 G16 |
|
1.05 |
|
|
lg4R-LC01 |
cag4R-MJ10R |
|
1MJ11R |
G01 G02 |
|
0.8 |
|
|
lg5X-JB04 |
ND |
|
1MJ13 |
G14 G19 |
|
0.5 |
|
|
lg1R-GAL1 |
cag1R-MJ16R |
|
1MJ13R |
G14 G19 |
|
0.3 |
|
psMiL |
lg1R-GAL1 |
cag1R-MJ13R (+) |
|
1MJ14R |
G08 G17 |
|
0.5 |
|
|
lg5X-JP02 |
MiLtd |
|
1MJ15R |
G03 G10 |
|
1.6 |
|
|
lg5X-JB04 |
cag5X-JP12 |
|
1MJ16R |
G04 G18 |
|
0.9 |
|
|
lg1R-GAL1 |
cag1R-MJ16R |
|
1MJ17R |
G05 G15 |
|
0.9 |
|
|
lg5X-JB04 |
cag5X-JP08d |
|
1MJ18R |
G02 G02 |
|
0.8 |
|
|
3L-FBR1 |
cag3L-JP23 |
|
1ML02 |
A05 A06 |
|
0.15 |
|
|
lg4L-JB06 |
MiLtd |
|
1ML03 |
A02 A06 |
|
0.4 |
|
|
lg1R-CHX1 |
cag1R-ML03 |
|
1ML04R |
A02 C06 |
|
0.15 |
|
|
lg4L-QD02R |
cag4L-ML04R |
|
1PM08 |
B17 B20 |
5 |
0.5 |
|
|
lg1L-mat |
cag1L-PM08 |
|
1QD02 |
C16 D06 |
|
0.65 |
|
|
lg4L-QD02 |
cag4L-QD02 |
|
1QD02R |
C16 D06 |
|
1.8 |
1QD02R |
|
lg4L-QD02R |
cag4L-JB12R |
|
1QD03R |
C18 D02 |
|
0.5 |
|
|
lg5X-JB04 |
MiLtd |
|
1RK01R |
E05 F20 |
|
0.45 |
|
|
lg3R-JO06 |
MiLtd |
|
1RK03 |
E02 F03 |
|
0.4 |
|
|
lg4L-BR19 |
MiLtd |
|
1RK04 |
E03 F01 |
|
1.1 |
|
|
lg4L-AS01 |
MiLtd |
|
1RK04a |
E03 F01 |
|
0.65 |
|
|
lg5X-JB04 |
cag5X-RK04a |
|
1RK05bR |
E04 F05 |
|
0.42 |
|
|
lg5X-JB04 (UM) |
cag5X-RK06R |
|
1RK05tR |
E04 F05 |
|
0.45 |
|
|
XX-RK05tR (UL) |
cagXX-RK05tR |
|
1RK06R |
E08 F16 |
|
0.7 |
|
|
lg5X-JB04 |
cag5X-RK06R |
|
1RK08 |
E04 F08 |
|
0.7 |
|
|
lg5X-LC16a |
cag5X-JO68 |
|
1RT01 |
F09 H15 |
|
0.75 |
|
|
lg1L-mat |
cag1L-RT01 |
|
1SN02 |
D03 D08 |
|
1.4 |
1SN02 |
|
1R-SN02 (UL) |
cag1R-YD02 |
|
1SN03 |
D03 D16 |
|
0.75 |
|
|
lg1R-GAL1 |
cag1R-MJ16R |
|
1SN05 |
D02 D05 |
|
1.1 |
|
|
lg1L-mat |
cag1L-XS24 |
|
1SN07a |
D02 D18 |
|
0.4 |
|
|
lg1L-mat |
cag1L-YD19 |
|
1SN07R |
D02 D18 |
|
0.7 |
|
|
lg5X-JB04 (UM) |
cag5X-LR01R |
|
1SN09 |
D03 D11 |
|
0.18 |
|
|
lg1L-mat |
cag1L-SN09 |
|
1SN11 |
D04 D11 |
|
0.9 |
1SN21 |
|
lg4L-BR19 |
MiLtd |
|
1SN13 |
D06 D16 |
|
0.45 |
|
|
lg5X-JB04 |
MiLtd |
|
1SN14 |
D15 D18 |
|
0.35 |
|
|
lg1R-CHX1 |
cag1R-CHX1 |
|
1SN21 |
D11 D11 |
|
0.9 |
1SN21 |
|
lg4L-BR19 |
MiLtd |
|
1SN21a |
D11 D11 |
|
0.5 |
|
|
5X-JB04 (UM) |
cag5X-LR01R |
|
1SN22 |
D08 D14 |
|
1.4 |
1SN02 |
|
lg5X-JB04 |
MiLtd |
|
1SP09 |
E06 F08 |
|
1.1 |
|
psMiL |
lg1L-mat |
cag1L-BD06 (-) |
|
1SP09a |
E06 F08 |
|
0.9 |
|
|
lg1R-GAL1 |
cag1R-SP09a |
|
1SP10 |
E06 F04 |
|
0.7 |
|
|
lg5X-JB04 |
MiLtd |
|
1SP11 |
E01 F05 |
|
0.25 |
|
|
lg5X-JB04 |
cag5X-BR02 |
|
1SP11R |
E01 F05 |
|
1.4 |
|
|
lg1L-mat |
MiLtd |
|
1SP13 |
E05 F02 |
|
0.5 |
|
|
lg2L-SP13 |
cag2L-SP13 |
|
1SP13R |
E05 F02 |
|
0.6 |
|
|
lg5X-JB04 |
cag5X-LR01R |
|
1SP15R |
E04 F04 |
|
0.9 |
|
|
lg5X-JB04 |
ND |
|
1SP16R |
E06 F01 |
|
0.8 |
|
|
lg5X-LC16a |
cag5X-SP16R |
|
1SP18 |
E04 F11 |
|
0.5 |
|
|
lg5X-JB04 |
MiLtd |
|
1SP18aR |
E04 F11 |
|
0.55 |
|
|
lg5X-JB04 |
MiLtd |
|
1SP18R |
E04 F11 |
|
1.7 |
|
|
lg1R-GAL1 |
cag1R-SP18R |
|
1XS01R |
B20 C05 |
|
1.3 |
|
psMiL |
lg5X-JP02 |
cag5X-XS01R (+) |
|
1XS03 |
A07 B06 |
|
0.45 |
|
|
lg1R-GAL1 |
cag1R-SP18R |
|
1XS04 |
A07 B16 |
|
0.95 |
1JO27 |
|
lg4L-AS01 |
ND |
|
1XS04a |
A07 B16 |
|
1.4 |
1JO27a |
|
lg4L-AS01 |
ND |
|
1XS08 |
A17 B18 |
|
1.3 |
|
|
lg3R-JO06 |
cag3R-XS60R |
|
1XS10 |
A08 B08 |
|
0.2 |
|
|
lg1L-mat |
MiLtd |
|
1XS11 |
A20 B16 |
|
0.35 |
|
|
lg5X-JB04 |
cag5X-LR01R |
|
1XS15 |
A07 B03 |
|
1.3 |
|
|
lg4L-AS01 |
ND |
|
1XS15a |
A07 B03 |
|
0.95 |
|
|
lg4L-AS01 |
cag4L-LS01 |
|
1XS16 |
C01 D11 |
|
0.45 |
|
|
lg4R-LC01 |
cag4R-XS16 |
|
1XS17 |
C01 D14 |
|
1.3 |
|
|
lg1R-GAL1 |
cag1R-XS17 |
|
1XS19 |
C02 D08 |
|
0.7 |
|
|
lg1L-mat |
MiLtd |
|
1XS24 |
C04 D02 |
|
0.45 |
|
|
lg1L-mat |
cag1L-XS24 |
|
1XS27 |
C04 D11 |
|
0.75 |
|
|
lg2R-JO66 |
cag2R-XS27 |
|
1XS32 |
C06 D04 |
5 |
0.4 |
|
|
lg1R-CHX1 |
cag1R-EstA |
|
1XS35 |
C06 D20 |
|
0.75 |
|
|
lg1L-mat |
MiLtd |
|
1XS36 |
C07 D08 |
|
1.55 |
|
|
lg1L-mat |
cag1L-XS36 |
|
1XS38 |
C10 D16 |
|
0.2 |
|
|
lg5X-JB04 |
cag5X-BR13 |
|
1XS41 |
C13 D03 |
|
0.6 |
|
|
2R-XS41 (UL) |
cag2R-XS41 |
|
1XS41a |
C13 D03 |
|
0.25 |
|
|
lg5X-LC16a |
MiLtd |
|
1XS42 |
C13 D01 |
|
0.9 |
|
|
4L-XS42 (UL) |
ND |
|
1XS43 |
C13 D14 |
|
0.7 |
|
|
lg3L-XS43 |
cag3L-XS43 (+) |
|
1XS47 |
C16 D20 |
|
0.4 |
|
|
2R-MPR1 (UM) |
cag2R-MPR1 |
|
1XS49 |
C18 D02 |
|
0.55 |
|
|
lg5X-JB04 |
MiLtd |
|
1XS51 |
C03 D20 |
|
2.1 |
|
|
2L-XS51 (UM) |
cag2L-XS51 |
|
1XS51aR |
C03 D20 |
5 |
0.3 |
|
|
1R-XS51aR (UL) |
MiLtd |
|
1XS53 |
C14 D03 |
|
0.9 |
1EM02 |
|
lg5X-JB04 |
cag5X-JP12 |
|
1XS60R |
C06 D03 |
|
0.8 |
|
|
lg3R-JO06 |
cag3R-XS60R |
|
1XS61R |
C06 D13 |
|
1.5 |
|
|
lg3R-AcpA |
cag3R-XS61R |
|
1XS72R |
C13 D08 |
|
1.5 |
1KP04R |
|
lg3R-KP04R |
MiLtd |
|
1XS74R |
C15 D04 |
|
0.35 |
|
|
lg4R-LC01 |
ND |
|
1XS75R |
C17 D04 |
|
1.1 |
1XS75R |
|
lg4L-AS01 |
MiLtd |
|
1YD02 |
E01 E06 |
5 |
0.6 |
|
|
lg1R-GAL1 |
cag1R-YD02 |
|
1YD03 |
E01 E12 |
|
1.9 |
1YD20 |
|
lg4L-AS01? |
cag4L-YD20 |
|
1YD03a |
E01 E12 |
|
0.6 |
|
|
1L-YD03a (UL) |
MiLtd |
|
1YD03R |
E01 E12 |
|
0.65 |
|
|
XX-YD03R (UL) |
MiLtd |
|
1YD07 |
E02 E20 |
|
0.75 |
|
|
lg5X-JB04 |
cag5X-LR01R |
|
1YD10 |
E03 E14 |
|
0.2 |
|
|
lg5X-LC16a |
cag5X-YD10 |
|
1YD11 |
E03 E15 |
|
0.45 |
|
|
lg1R-GAL1 |
cag1R-YD11 |
|
1YD11a |
E03 E15 |
|
0.7 |
|
|
lg4R-LC01 |
cag4R-YD11a |
|
1YD12 |
E04 E14 |
|
0.43 |
|
|
4L-BR19 (UL) |
cag4L-BR19 |
|
1YD13 |
E05 E09 |
|
0.65 |
|
|
lg2R-MPR1 |
cag2R-AT04 |
|
1YD14 |
E05 E10 |
|
1.2 |
|
|
lg5X-JB04 |
cag5X-YD14 (-) |
|
1YD16 |
E07 E20 |
|
0.6 |
|
|
lg5X-LC16a |
cag5X-YD16 |
|
1YD19 |
E15 E18 |
|
0.95 |
|
|
lg1L-mat |
cag1L-YD19 |
|
1YD20 |
E12 E12 |
|
2.0 |
1YD20 |
|
lg4L-AS01 |
cag4L-YD20 |
|
1YD20R |
E12 E12 |
|
1.0 |
1YD20R |
|
lg1L-mat |
MiLtd |
|
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